Training materials
Related resources: ChIP-Seq data analysis dataset or Event or Introduction to the EGA and sharing sensitive data or MGnify or Proteomics dataset or Recoding
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Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Presentation
DS Wizard and its Use
• beginnerData management DMP DMP tools data stewardship FAIR FAIR data -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the Estrogen receptor
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Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
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Tutorial
Proteomics - Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
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Tutorial
Proteomics - Peptide and Protein ID using SearchGUI and PeptideShaker
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Tutorial
Proteomics - Secretome Prediction
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