Training materials
Related resources: COBRA Toolbox or MetaboLights or Metagenomics dataset or Public Health Alliance for Genomic Epidemiology or Transcriptomics slides or User Interface and Features dataset
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
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Tutorial
User Interface and Features - Jupyter: Use Jupyter notebooks in Galaxy
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
Metagenomics - Analyses of metagenomics data - The global picture
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Tutorial
Metagenomics - 16S Microbial Analysis with Mothur