Training materials
Related resources: COBRA Toolbox or Genome Annotation slides or Sequence analysis dataset or seq-seq-pan
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Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
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Tutorial
Genome Annotation - Genome annotation with Prokka
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Tutorial
Sequence analysis - RAD-Seq to construct genetic maps
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Tutorial
Sequence analysis - RAD-Seq de-novo data analysis
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Tutorial
Sequence analysis - RAD-Seq Reference-based data analysis
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Tutorial
Sequence analysis - Mapping
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Tutorial
Sequence analysis - Quality Control