Training materials
Related resources: COBRA Toolbox or Contributing to the Galaxy Training Material sl... or GitHub or HoloFood Project or Public Health Alliance for Genomic Epidemiology
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
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Tutorial
Contributing to the Galaxy Training Material - Contributing with GitHub via command-line