Training materials
Target audience: Research Scientists or Researcher or Undergraduate students or beginner bioinformaticians
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Video, Training materials, E-learning
Validate Graph Data with SHACL
•• intermediateMedical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
Video
Ten simple rules for making training materials FAIR
• beginnerFAIR data Data handling FAIR ELIXIR-CONVERGE -
Series of videos, Video, youtube video
Introduction to research data management, data management planning and services provided by CSC – IT Center for Science
• beginnerDMP RDM plan research data management data management data management plan ELIXIR-CONVERGE CONVERGE -
Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
Notes, Scripts
MATHEMATICS BOOT CAMP: Introduction to Complex Systems Tools
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course materials
Learning structural bioinformatics and evolution with a snake puzzle
•• intermediateBioinformatics Evolutionary biology Molecular biology Protein structure analysis -
course materials, Training materials, Slides
ELIXIR TtR course: Basic genomics using advanced analysis tools
• beginnerGenomics Galaxy training eLearning EeLP -
e-learning
UNIX Fundamentals
• beginnerComputer science Problem based learning Programming Unix