2 materials found
Operations: RNA-Seq analysis
Introduction to Workflows with Common Workflow Language
Introduction to workflow thinking for novices, using the Common Workflow Language
Scientific topics: Workflows
Operations: RNA-Seq analysis
Keywords: cwl, commonwl, sciworkflows, workflows
Resource type: Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
https://github.com/carpentries-incubator/cwl-novice-tutorial
http://tess.elixir-uk.org/materials/introduction-to-workflows-with-common-workflow-language
Introduction to workflow thinking for novices, using the Common Workflow Language
Michael R. Crusoe
Gerard Capes
Douglas Lowe
Anne Luesink
Stian Soiland-Reyes
Toby Hodges
Sehrish Kanwal
Pedro L Fernandes
Workflows
cwl, commonwl, sciworkflows, workflows
esearchers and research software engineers who would like to begin automating their analyses in workflows.
Tutorial on CARNIVAL
This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL
Scientific topics: RNA-Seq, Omics, Gene expression, Molecular interactions, pathways and networks
Operations: RNA-Seq analysis, Network analysis
Keywords: HPC, Signaling, RNAseq, transcriptomics
Resource type: Tutorial
Tutorial on CARNIVAL
https://saezlab.github.io/transcriptutorial/
http://tess.elixir-uk.org/materials/tutorial-on-carnival
This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL
Bartosz Bartmanski
RNA-Seq
Omics
Gene expression
Molecular interactions, pathways and networks
HPC, Signaling, RNAseq, transcriptomics