Training materials
Licence: Creative Commons Attribution 4.0 International
and Scientific topics: Toxicology or Nucleic acid sequence analysis or Transcription factors and regulatory sites or Biosciences or Software engineering
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Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
hands-on tutorial
Hands-on for 'Python - Coding Style' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Virtual Environments For Software Development' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Type annotations' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Conda Environments For Software Development' tutorial
•• intermediateSoftware engineering data-science conda jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Multiprocessing' tutorial
••• advancedSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Testing' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook