Training materials
Scientific topics: Ontology and terminology or Protein structure analysis or Toxicology or Workflows
and Licence: Creative Commons Attribution 4.0 International or GNU General Public License v3.0 only
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RomainFeron/workshop-snakemake-sibdays2022
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Presentation
FAIRtracks and Omnipy – FAIRtracks interoperability story
•• intermediateData submission, annotation, and curation Data identity and mapping Data quality management Data governance Workflows Data handling -
Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
WEBINAR: bio.tools - making it easier to find, understand and cite biological tools and software
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Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
Presentation, course materials
Introduction to Nextflow workshop
• beginnerWorkflows Nextflow DSL2 -
Documentation, API reference
bio.tools documentation
• beginnerBioinformatics Data submission, annotation, and curation Computational biology Ontology and terminology Data retrieval Tools Curation Software Sofware curation Tool curation -
Tutorial
OpenRiskNet: Ontology Walkthrough and Workshop
• beginnerToxicology Ontology and terminology
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