Training materials
Keywords: Interoperability or Python or Rare Diseases or Reproducibility or evaluation
and Resource type: Jupyter notebook or e-learning
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e-learning
Identifiers in Bioinformatics
• beginnerData management Data identity and mapping Data handling Data retrieval Database search Interoperability Identifiers Standards -
e-learning
Interoperable File Formats
• beginnerData management Formatting Interoperability File formats Standards -
e-learning
Vocabularies for bioinformatics
• beginnerBioinformatics Data management Data submission, annotation, and curation Data handling Data retrieval Database search Ontologies Interoperability Standardised vocabulary Standards -
e-learning
Explore and Visualize Your Data with Python
•• intermediateData visualisation Bioinformatics Python Data analysis -
e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
e-learning
Ensembl: REST API
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Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
course materials, e-learning
Eurordis Open Academy
• beginnerRare diseases Rare Diseases & Research Rare Diseases -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
e-learning
The Turing Way