Training materials
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lessons
Bring Your Own Data Management Plan
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WORKSHOP: Translating workflows into Nextflow with Janis
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WORKSHOP: Unlocking nf-core - customising workflows for your research
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course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
youtube video, video
ELIXIR resources and Data Management Plans tools: RDMkit and Data Stewardship Wizard
• beginnerData management FAIR data ELIXIR-CONVERGE ELIXIR DMP data management plan research data management FAIR principles DMP tools DMP templates tool template DMP evaluation RDMkit Data Stewardship Wizard DSW -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
WORKSHOP: RNA-Seq: reads to differential genes and pathways
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course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
WEBINAR: Portable, reproducible and scalable bioinformatics workflows using Nextflow and Pawsey Nimbus Cloud
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Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow
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