Training materials
Difficulty level: Intermediate
and Scientific topics: Data management or Genomics or Image analysis or Transcriptomics
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Bioinformatics, Computational Biology, Computer Science, Programming, Coding, Education, Data Science, Transcriptomics, Machine Learning
R for Data Science
•• intermediateBioinformatics Computational biology Machine learning Transcriptomics Computational Biology Coding Programming Data Science Data Analysis Computer Science Machine Learning -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Series of videos
Query Expansion services - tutorial
•• intermediateData management Data Query data Query expansion -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
hands-on tutorial
Hands-on for 'Visualization of RNA-Seq results with Volcano Plot in R' tutorial
•• intermediateTranscriptomics transcriptomics interactive-tools -
slides
Slides for 'An introduction to scRNA-seq data analysis' tutorial
•• intermediateTranscriptomics single-cell español -
Video, Training materials, E-learning
Validate Graph Data with SHACL
•• intermediateMedical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
Presentation
DSW Workshop for Finnish Data Support Personnel
•• intermediateData management DMP DMP tools data stewardship FAIR FAIR data -
Video, Slides, Webinar
DSW Template Development Kit: The Tutorial
•• intermediateData management data stewardship data management plan FAIR data management software tools DMP templates template development
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