Training materials
Difficulty level: Intermediate
and Keywords: Biomodelling or Information visualisation or bioinformatics or metabolomics or transcriptomics
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hands-on tutorial
Hands-on for 'Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)' tutorial
•• intermediateMetabolomics metabolomics -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
Video
RDMbites: Sequencing data
•• intermediatetranscriptomics FASTQ FastQC Sequencing -
hands-on tutorial
Hands-on for 'Visualization of RNA-Seq results with Volcano Plot in R' tutorial
•• intermediateTranscriptomics transcriptomics interactive-tools -
hands-on tutorial
Hands-on for 'Mass spectrometry: LC-MS preprocessing with XCMS' tutorial
•• intermediateMetabolomics metabolomics -
hands-on tutorial
Hands-on for 'Mass spectrometry imaging: Finding differential analytes' tutorial
•• intermediateMetabolomics metabolomics -
Tutorial
Tutorials on COBREXA
•• intermediatePersonalised medicine Simulation experiment Modelling and simulation cell-level simulations Biomodelling HPC -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE