Training materials
Difficulty level: Intermediate
and Keywords: Data management planning or EeLP or Statistical-model or eLearning or jupyter-notebook or transcriptomics
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Online material, online course
Workshop on Resources for Plant Sciences, 2023
•• intermediatePlant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
hands-on tutorial
Hands-on for 'Python - Coding Style' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Virtual Environments For Software Development' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Type annotations' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Conda Environments For Software Development' tutorial
•• intermediateSoftware engineering data-science conda jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Testing' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
Video
RDMbites: Sequencing data
•• intermediatetranscriptomics FASTQ FastQC Sequencing -
hands-on tutorial
Hands-on for 'Visualization of RNA-Seq results with Volcano Plot in R' tutorial
•• intermediateTranscriptomics transcriptomics interactive-tools -
hands-on tutorial
Hands-on for 'Python - Subprocess' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook
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