Training materials
Difficulty level: Beginner
and Resource type: Computer Software or Handout or Open educational resource or e-learning or hackathon or hands-on tutorial
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e-learning
Use V-pipe to evaluate SARS-CoV-2 sequence variability
• beginnerVirology Sequence analysis SARS-CoV-2 Variant calling -
e-learning
Find out about SARS-CoV-2 glycobiology using GlyConnect
• beginnerVirology Protein sites, features and motifs SARS-CoV-2 -
e-learning
Retrieve and list information on SARS-CoV-2 from ViralZone
• beginnerVirology Molecular biology SARS-CoV-2 -
e-learning
neXtProt : Exploring human proteins
• beginnerProteins Proteomics Proteins (proteins) human -
e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
e-learning
Introduction to single cell RNAseq analysis workshop
• beginnerbioinformatics RNAseq single cell NGS python R -
e-learning
Introduction to bulk RNAseq analysis workshop
• beginnerbioinformatics RNAseq bulk NGS -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa