Training materials
Difficulty level: Beginner or Intermediate
and Resource type: e-learning or Jupyter notebooks or Tutorial
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e-learning
Interoperable File Formats
• beginnerData management Formatting Interoperability File formats -
Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
e-learning
Vocabularies for bioinformatics
• beginnerBioinformatics Ontologies Interoperability Standardised vocabulary -
Tutorial, Presentation
Materials from 'Introduction to High Performance Computing for Life Scientists' course
•• intermediateComputational biology HPC GPU parallel computing -
e-learning
Introduction to CLC Main Workbench
• beginnerSequence alignment Sequence Analysis -
e-learning
Introduction to Linux command line
• beginnerOperating system name Linux -
lessons, e-learning
Introduction to Data Management Practices - Data Management Plans
• beginnerData management FAIR data Open science CONVERGE Data Stewardship Wizard Data management plan -
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Introduction to RStudio
• beginnerData management FAIR data RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Scripted analysis with R
• beginnerData management FAIR data Bioinformatics Data visualisation RStudio CONVERGE ggPlot