Training materials
Target audience: Researchers or Students or beginner bioinformaticians
and Contributors: Pinar Alper or Ross Lazarus or Torsten Seemann
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hands-on tutorial
Hands-on for 'Microbial Variant Calling' tutorial
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hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'ToolFactory: Generating Tools From More Complex Scripts' tutorial
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hands-on tutorial
Hands-on for 'ToolFactory: Generating Tools From Simple Scripts' tutorial
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slides
Slides for 'Genome annotation with Prokka' tutorial
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slides
Slides for 'Introduction to the ToolFactory tutorial.' tutorial
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Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Presentation
Reproducible analysis
• beginnerData architecture, analysis and design Workflows Literate programming Reproducible Science Data analysis