Training materials
Difficulty level: Intermediate
and Contributors: Kenneth Hoste or Lennart Martens or Mark Beaumont or Prof. Michael J E Sternberg or Robert Andrews
-
hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
Video
RDMbites: Image data
•• intermediateimaging data management -
Video
RDMbites: Sequencing data
•• intermediatetranscriptomics FASTQ FastQC Sequencing -
Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) -
Documentation, Exercise, Handout, Scripts
PGDH19 - Population Genetics Demographic History: model-based approaches (2019)
•• intermediatePopulation Genomics Phylogenetics -
Documentation, Exercise, Handout, Scripts
PDA19 - Proteomics Data Analysis (2019)
•• intermediateProteomics Biological databases Mass spectrometry data -
Documentation, Exercise, Handout, Scripts
PDA18 - Proteomics Data Analysis (2018)
•• intermediateProteomics Biological databases Mass spectrometry data -
Documentation, Exercise, Handout, Scripts
PGDH18 - Population Genetics and Demographic History: model-based approaches (2018)
•• intermediatePopulation Genomics Phylogenetics