Introduction to Protein Structure Analysis
This training session will provide the basics of protein structure determination and how this information is stored in databases. We will explore and search in online databases containing protein structure information. With the aid of the Yasara View program we will visualize the structure....
Operations: Visualisation
Keywords: Protein structure visualisation
Resource type: e-learning
Introduction to Protein Structure Analysis
https://elearning.bits.vib.be/courses/protein-structure-analysis/
http://tess.elixir-uk.org/materials/introduction-to-protein-structure-analysis
This training session will provide the basics of protein structure determination and how this information is stored in databases. We will explore and search in online databases containing protein structure information. With the aid of the Yasara View program we will visualize the structure. Different hands-on exercises will allow you to compare the structure of homologues, to predict a structural model of proteins (without any structure information) and to find homologous structures. We will use online tools to quantify various interactions in the structures.
## Objectives
* Get to know the data generated from protein structure determination experiments (high-resolution NMR spectroscopy, X-ray crystallography, electron microscopy, ...) and where to get it.
* Display protein structure data and compare structures, through the use of Yasara.
* Create high-quality graphical representations of the structures.
* Calculate the effect of mutations on the stability of your protein.
Alexander Botzki
Joost Van Durme
Janick Mathys
Protein structure visualisation
Life Science Researchers
ADER19F - Analysis of Differential Expression with RNAseq (First course in 2019)
Training material for an introductory course that covers practical aspects of the analysis of differential gene expression by RNAseq.
Keywords: RNA-Seq, Genomics, RNA
Resource type: Documentation, Exercise, Handout, Scripts
ADER19F - Analysis of Differential Expression with RNAseq (First course in 2019)
https://gtpb.github.io/ADER19F/
http://tess.elixir-uk.org/materials/ader19f-analysis-of-differential-expression-with-rnaseq-first-course-in-2019
Training material for an introductory course that covers practical aspects of the analysis of differential gene expression by RNAseq.
The Gulbenkian Training Programme in Bioinformatics
Daniel Sobral
Daniel Faria
Daniel Neves
RNA-Seq, Genomics, RNA
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
ADER18S - Analysis of Differential Expression with RNAseq (Second course in 2018)
Training material for introductory course that covers practical aspects of the analysis of differential gene expression by RNAseq.
Keywords: RNA-Seq, Genomics, RNA
Resource type: Documentation, Exercise, Handout, Scripts
ADER18S - Analysis of Differential Expression with RNAseq (Second course in 2018)
https://gtpb.github.io/ADER18S/
http://tess.elixir-uk.org/materials/ader18s-analysis-of-differential-expression-with-rnaseq-second-course-in-2018
Training material for introductory course that covers practical aspects of the analysis of differential gene expression by RNAseq.
The Gulbenkian Training Programme in Bioinformatics
Daniel Sobral
Daniel Faria
Daniel Neves
RNA-Seq, Genomics, RNA
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
ADER18F - Analysis of Differential Expression with RNAseq (First course in 2018)
Training material for an introductory course that covers practical aspects of the analysis of differential gene expression by RNAseq.
Keywords: RNA-Seq, Genomics, RNA
Resource type: Documentation, Exercise, Handout, Scripts
ADER18F - Analysis of Differential Expression with RNAseq (First course in 2018)
https://gtpb.github.io/ADER18F/
http://tess.elixir-uk.org/materials/ader18f-analysis-of-differential-expression-with-rnaseq-first-course-in-2018
Training material for an introductory course that covers practical aspects of the analysis of differential gene expression by RNAseq.
The Gulbenkian Training Programme in Bioinformatics
Daniel Sobral
Daniel Faria
Daniel Neves
RNA-Seq, Genomics, RNA
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
Bioinformatics Summer School 2019
This one-week intensive summer school in bioinformatics will focus on data analysis and high throughput biology, with a special focus on R/Bioconductor and its application to a wide range of topics across bioinformatics and computational biology. The course is intended for researchers who are...
Scientific topics: Statistics and probability, Omics, RNA-Seq, Proteomics
Operations: Data handling
Bioinformatics Summer School 2019
https://uclouvain-cbio.github.io/BSS2019/#schedule
http://tess.elixir-uk.org/materials/bioinformatics-summer-school-2019
This one-week intensive summer school in bioinformatics will focus on data analysis and high throughput biology, with a special focus on R/Bioconductor and its application to a wide range of topics across bioinformatics and computational biology. The course is intended for researchers who are familiar with omics experimental technologies and their applications in biology, have had some exposure with R, and who want to learn or expand their bioinformatics skills.
Martin Morgan
Laurent Gatto
Janick Mathys
Lieven Clement
Charlotte Soneson
Koen Van den Berge
Oliver Crook
Statistics and probability
Omics
RNA-Seq
Proteomics
PhD students
