Training materials
Contributors: Dr. Nils Gehlenborg or Allegra Via or Eivind Coward or Florian Christoph Sigloch
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hands-on tutorial
Hands-on for 'Label-free versus Labelled - How to Choose Your Quantitation Method' tutorial
• beginnerProteomics proteomics DDA -
hands-on tutorial
Hands-on for 'Secretome Prediction' tutorial
•• intermediateProteomics proteomics human -
hands-on tutorial
Hands-on for 'Peptide and Protein Quantification via Stable Isotope Labelling (SIL)' tutorial
••• advancedProteomics proteomics DDA SILAC -
hands-on tutorial
Hands-on for 'Peptide and Protein ID using SearchGUI and PeptideShaker' tutorial
• beginnerProteomics proteomics DDA HeLa -
hands-on tutorial
Hands-on for 'Detection and quantitation of N-termini (degradomics) via N-TAILS' tutorial
•• intermediateProteomics proteomics -
hands-on tutorial
Hands-on for 'Peptide and Protein ID using OpenMS tools' tutorial
••• advancedProteomics proteomics DDA HeLa -
hands-on tutorial
Hands-on for 'Protein FASTA Database Handling' tutorial
• beginnerProteomics proteomics DDA -
Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
•• intermediateData retrieval Data handling Bioinformatics Biology Biological databases -
Video
Visualization Approaches for Biomedical Omics Data: Putting It All Together