Training materials
Licence: Creative Commons Attribution 4.0 International
and Contributors: Data Carpentry or Erwan Corre or Mikko Rautiainen or Sonika Tyagi or Stephen Taylor or Sundeep Agarwal
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'De novo transcriptome assembly, annotation, and differential expression analysis' tutorial
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slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Quality Control
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Documentation, Exercise, Handout, Scripts
CPANG19 - Computational PANGenomics (2019)
•• intermediateGenomics -
Documentation, Exercise, Handout, Scripts
CPANG18 - Computational PANGenomics (2018)
•• intermediateGenomics