Training materials
Difficulty level: Beginner
and Contributors: Daniel Faria or Daniel Thomas Lopez or Erasmus+ Programme or Erwan Corre or Vilem Ded
-
Online material, Recording, hands-on tutorial
MaBoSS: a tool for modelling biological systems
• beginnerMathematical modelling cancer Signalling boolean modelling logical modelling -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'CLI basics' tutorial
• beginnerdata-science bash jupyter-notebook -
hands-on tutorial
Hands-on for 'Introduction to Python' tutorial
• beginnerdata-science jupyter-notebook -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Reproducible analysis
• beginnerData architecture, analysis and design Workflows Literate programming Reproducible Science Data analysis