Training materials
Scientific topics: Software engineering
and Contributors: Anil S. Thanki or Emma Barnes or Fotis E. Psomopoulos or Markus Englund or Mikko Rautiainen
-
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
hands-on tutorial
Hands-on for 'Plotting in Python' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced R in Galaxy' tutorial
•• intermediateSoftware engineering data-science R -
hands-on tutorial
Hands-on for 'Introduction to Python' tutorial
• beginnerSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced Python' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook