Training materials
Contributors: Anil S. Thanki or Christopher Barnett or Collins Assisi or Eija Korpelainen or Stian Soiland-Reyes
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ekorpela/cloud-vm-workshop
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hands-on tutorial
Galaxy Basics for everyone
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Analysis of molecular dynamics simulations
•• intermediateComputational chemistry -
hands-on tutorial
High Throughput Molecular Dynamics and Analysis
••• advancedComputational chemistry -
hands-on tutorial
Running molecular dynamics simulations using NAMD
•• intermediateComputational chemistry -
hands-on tutorial
Setting up molecular systems
•• intermediateComputational chemistry -
slides
Introduction to 'Introduction to Galaxy Analyses'
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Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
Jupyter notebook
BioExcel Building Blocks (BioBB) Training Material
• beginnermolecular dynamics Docking Modeling life sciences -
Slides, course materials
Introduction to using cloud and containers for training - OpenStack and Docker oriented view
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