Training materials
Difficulty level: Intermediate
and Contributors: Anatole Chessel or Avans Hogeschool or Munazah Andrabi or Rafael C Jimenez or Wolfgang Maier
-
hands-on tutorial
Sequence data submission to ENA
•• intermediateFAIR ENA sequence datasets -
hands-on tutorial
Hands-on for 'Avian influenza viral strain analysis from gene segment sequencing data' tutorial
•• intermediateGenetic variation variant-analysis virology -
Video
RDMbites: Image data
•• intermediateimaging data management -
Video
RDMbites: Sequencing data
•• intermediatetranscriptomics FASTQ FastQC Sequencing -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediateGenetic variation variant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads' tutorial
•• intermediateSequence assembly assembly covid19 -
hands-on tutorial
Hands-on for 'SQL with R' tutorial
•• intermediateSoftware engineering data-science SQL R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Hands-on for 'SQL with Python' tutorial
•• intermediateSoftware engineering data-science SQL Python jupyter-notebook -
hands-on tutorial
Hands-on for 'Make & Snakemake' tutorial
•• intermediateSoftware engineering data-science -
hands-on tutorial
Hands-on for 'Advanced CLI in Galaxy' tutorial
•• intermediateSoftware engineering data-science bash jupyter-notebook
- 1
- 2