Training materials
Difficulty level: Intermediate
and Contributors: Allegra Via or Sabine Österle or Christopher Barnett
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hands-on tutorial
Hands-on for 'Analysis of molecular dynamics simulations' tutorial
•• intermediateComputational chemistry computational-chemistry -
hands-on tutorial
Hands-on for 'Running molecular dynamics simulations using NAMD' tutorial
•• intermediateComputational chemistry computational-chemistry -
hands-on tutorial
Hands-on for 'Setting up molecular systems' tutorial
•• intermediateComputational chemistry computational-chemistry -
Video, Training materials, E-learning
Validate Graph Data with SHACL
•• intermediateMedical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
•• intermediateData retrieval Data handling Bioinformatics Biology Biological databases