Training materials
Difficulty level: Intermediate
and Contributors: Allegra Via or Eija Korpelainen @eija, ekorpelainen@gmail.com or Bazante Sanders
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hands-on tutorial
Hands-on for 'Python - Subprocess' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Globbing' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Argparse' tutorial
•• intermediateSoftware engineering data-science -
hands-on tutorial
Hands-on for 'Make & Snakemake' tutorial
•• intermediateSoftware engineering data-science -
hands-on tutorial
Hands-on for 'Advanced CLI in Galaxy' tutorial
•• intermediateSoftware engineering data-science bash jupyter-notebook -
Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
•• intermediateData retrieval Data handling Bioinformatics Biology Biological databases -
course materials
Single cell RNA-seq data analysis with R
•• intermediateRNA-Seq RNA-Seq Single Cell technologies scRNA-seq