Training materials
Difficulty level: Intermediate
and Contributors: Allegra Via or Dr. Sean I O’Donoghue or Bazante Sanders
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hands-on tutorial
Hands-on for 'Python - Subprocess' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Globbing' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Argparse' tutorial
•• intermediateSoftware engineering data-science -
hands-on tutorial
Hands-on for 'Make & Snakemake' tutorial
•• intermediateSoftware engineering data-science -
hands-on tutorial
Hands-on for 'Advanced CLI in Galaxy' tutorial
•• intermediateSoftware engineering data-science bash jupyter-notebook -
Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
•• intermediateData retrieval Data handling Bioinformatics Biology Biological databases