Training materials
Contributors: Allegra Via or Chris Evelo or Stian Soiland-Reyes or The Carpentries Lab
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carpentries-lab/metagenomics-organization
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carpentries-lab/metagenomics-shell
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carpentries-lab/metagenomics-R
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carpentries-lab/metagenomics-workshop
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carpentries-lab/metagenomics-analysis
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Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
Jupyter notebook
BioExcel Building Blocks (BioBB) Training Material
• beginnermolecular dynamics Docking Modeling life sciences -
Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
•• intermediateData retrieval Data handling Bioinformatics Biology Biological databases -
A network biology workflow to study transcriptomics data of the diabetic liver
• beginnerBiological networks Network Visualization