Training materials
Content provider: CSC - IT Center for Science or ELIXIR Slovenia or Proteomics Academy or PerMedCoE
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
Tutorial
From transcriptomics to mechanistic models of signalling
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Tutorial, Presentation
Materials from 'Introduction to High Performance Computing for Life Scientists' course
•• intermediateComputational biology HPC GPU parallel computing -
Learning pathway
Linux learning pathways
• beginnerBioinformatics Linux Programming -
Tutorial, Video, Series of videos
Federated EGA: Introductory videos
• beginnerFederated EGA FEGA metadata ELIXIR-CONVERGE Phenotype SARS-CoV-2 -
Training materials, Series of videos
Visium data analysis (spatially resolved transcriptomics) 2022
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Online material, Recording, hands-on tutorial
MaBoSS: a tool for modelling biological systems
• beginnerMathematical modelling cancer Signalling boolean modelling logical modelling -
Course materials
Research Data Management -course
• beginnerRDM research data management data management CONVERGE -
Introduction to using containers - OpenShift, Kubernetes and Docker oriented view
• beginnerContainers Kubernetes Cloud computing