Training materials
Content provider: CSC - IT Center for Science or Bioinformatics and Biomathematics Training Hub or PerMedCoE
and Licence: Creative Commons Attribution-NoDerivatives 4.0 or License Not Specified or GNU General Public License v2.0 only
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Tutorial
From transcriptomics to mechanistic models of signalling
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Learning pathway
Linux learning pathways
• beginnerBioinformatics Linux Programming -
Training materials, Series of videos
Visium data analysis (spatially resolved transcriptomics) 2022
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Course materials
Research Data Management -course
• beginnerRDM research data management data management CONVERGE -
Introduction to using containers - OpenShift, Kubernetes and Docker oriented view
• beginnerContainers Kubernetes Cloud computing -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Slides, Training materials, Series of videos
Single-cell RNA-seq data analysis using Chipster 2022
• beginnerscRNA-seq -
Slides, course materials
Introduction to using cloud and containers for training - OpenStack and Docker oriented view
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course materials
Single-cell RNA-seq data analysis with R 2022
•• intermediateRNA-Seq RNA-Seq Single Cell technologies scRNA-seq