Training materials
-
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
Bioinformatics of Genomic Medicine 2018 Module 2-Introduction to Tools, Computing Infrastructure, and Data
-
Informatics on High-Throughput Sequencing Data 2018 Module 5-Structural Variant Calling
-
Informatics on High-Throughput Sequencing Data 2018 Module 4-Small-Variant Calling and Annotation
-
Informatics on High-Throughput Sequencing Data 2018 Module 3-Genome Alignment
-
Tutorial
Galaxy Server administration - Ansible
-
Informatics on High-Throughput Sequencing Data 2017 Module 5-Structural Variant Calling