Training materials
Authors: Maria Lehtivaara or moheydarian or tseemann
and Related resources: Chipster or Input datasets
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Slides, Training materials, Series of videos
Single-cell RNA-seq data analysis using Chipster 2022
• beginnerscRNA-seq -
Tutorial
Genome Annotation - Genome annotation with Prokka
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Tutorial
Variant Analysis - Microbial Variant Calling
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
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Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
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Tutorial
Transcriptomics - De novo transcriptome reconstruction with RNA-Seq