Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Jessica Kirkpatrick krkptrc2@illinois.edu or Laura Leroi or Marta Lloret Llinares or Mateo Boudet or erxleben
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Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateSequence assembly assembly quality control -
slides
Slides for 'Genome assembly quality control.' tutorial
• beginnerSequence assembly assembly -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (prokaryotes)' tutorial
•• intermediategenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateSequence assembly assembly pacbio -
hands-on tutorial
Hands-on for 'RNA-Seq analysis with AskOmics Interactive Tool' tutorial
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slides
Slides for 'Refining Genome Annotations with Apollo' tutorial
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slides
Slides for 'An introduction to get started in genome assembly and annotation' tutorial
• beginnerSequence assembly assembly -
slides
Slides for 'Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies' tutorial
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