Training materials
Authors: Jan Slifka or Alexander Botzki or The Carpentries or Personalized Health Informatics Group
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tutorial
TeSS, how can I help you?
• beginnerFAIR OPEN Bioinformatics Teaching TeSS -
hands-on tutorial
Explore Protein Structures with ChimeraX
• beginnerProtein structure analysis Sequence analysis Structure visualisation ChimeraX Protein Structure analysis -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
hands-on tutorial
Hands-on for 'Python - Coding Style' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
hands-on tutorial
Hands-on for 'Virtual Environments For Software Development' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Conda Environments For Software Development' tutorial
•• intermediateSoftware engineering data-science conda jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Testing' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook