Training materials
Difficulty level: Beginner
and Authors: Friederike Ehrhart or Janick Mathys or Marie-Claude Blatter or The Gulbenkian Training Programme in Bioinforma... or Vasundra Touré
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hands-on tutorial
R introduction
• beginnerR script Software engineering data visualisation programming -
Protein Sequence Databases and Sequence Annotation at UniProtKB
• beginneralan bridge group database curation ontology proteins and proteomes training -
Mining enzyme data in UniProtKB using Rhea
• beginnerbiochemistry data mining lipids ontology proteins and proteomes training alan bridge group -
e-learning
Basic statistics in Prism
• beginnerStatistics and probability statistics -
e-learning
Basic statistics theory
• beginnerStatistics and probability statistics -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
Training materials
Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide
• beginnerBioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material -
Documentation, Exercise, Handout, Scripts
ELB19F - Entry level Bioinformatics (First course in 2019)
• beginnerBioinformatics Sequencing
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