Training materials
Authors: Eija Korpelainen or Jana Freeman or Petri Auvinen or Philip Krauss
and Resource type: Jupyter notebook or Video
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Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology -
Video, Training materials, E-learning
Validate Graph Data with SHACL
•• intermediateMedical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation -
Video, Webinar
ELIXIR CZ Friday Coffee #5: Data Management with Data Stewardship Wizard
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course materials, Training materials, Slides, Video
RNA-seq data analysis using Chipster
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course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
course materials, Video
Community analysis of amplicon sequencing data (16S rRNA)
• beginner -
course materials, Video
Virus detection using small RNA-seq
• beginnerRNA-Seq -
course materials, Video
RNA-seq data analysis
• beginnerRNA-Seq -
Video, course materials
Metagenomics data analysis
• beginnerMetagenomics