Training materials
Authors: Delphine Lariviere or Janick Mathys or Jonathan Karr or Sergio Martínez Cuesta
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Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML SBML BNGL -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE -
Tutorial
Datanator tutorial
• beginnerMolecular biology Cell biology Systems biology Bioinformatics Omics Query and retrieval Filtering genomics Proteomics transcriptomics Metabolomics reaction kinetics Kinetic modeling meta analysis -
Training materials
Introduction to GitHub
• beginnerGitHub Reproducibility -
Training materials
Beginners introduction to Git and GitHub
• beginnerGit GitHub control version Reproducibility -
Training materials
Summer School 2018 TrainMalta: Epigenomics. Introduction to Unix and R
• beginnerUnix R-programming -
course materials
Data Carpentry in R
• beginnerData analysis Data carpentry SoftwareCarpentry -
course materials
Data visualisation with R and ggplot2
• beginnerR-programming -
course materials
Introduction to GitHub for chemists
• beginnerGit GitHub