Training materials
Difficulty level: Beginner
and Authors: Christof De Bo or Dayane Araujo or Jessica Kirkpatrick krkptrc2@illinois.edu or Maria Lehtivaara or Philippe Lemercier
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e-learning
Introduction to CLC Main Workbench
• beginnerSequence alignment Sequence Analysis -
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
Training materials
Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide
• beginnerBioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material -
Life Science Literature Database, Life Sciences Literature Database
Using Europe PMC for effective literature research
• beginnerLiterature search peer reviewed articles Europe PMC, Preprints Data links Annotations Europe PMC, ORCID -
Slides, Training materials, Series of videos
Single-cell RNA-seq data analysis using Chipster 2022
• beginnerscRNA-seq -
course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
course materials, Video
Community analysis of amplicon sequencing data (16S rRNA)
• beginner -
course materials, Video
RNA-seq data analysis
• beginnerRNA-Seq -
BLAST and multiple sequence alignment (MSA) programs
• beginnerBlast E learning Multiple sequence alignment -
ViralZone
Phylogenetics of animal viral pathogens
• beginnerAnimal pathogens E learning Phylogenetics