Training materials
Authors: Christof De Bo or David Wishart or Erasmus+ Programme or Jessica Kirkpatrick krkptrc2@illinois.edu or Nicola Soranzo or Saskia Hiltemann
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e-learning
Introduction to CLC Main Workbench
• beginnerSequence alignment Sequence Analysis -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Hands-on for 'Trio Analysis using Synthetic Datasets from RD-Connect GPAP' tutorial
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hands-on tutorial
Hands-on for 'Calling variants in diploid systems' tutorial
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hands-on tutorial
Hands-on for 'Genomic Data Visualisation with JBrowse' tutorial
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hands-on tutorial
Hands-on for 'Visualisation with Circos' tutorial
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hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (prokaryotes)' tutorial
•• intermediategenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Set up a Galaxy for Training' tutorial
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hands-on tutorial
Hands-on for 'Scripting Galaxy using the API and BioBlend' tutorial
• beginnerSoftware engineering dev jupyter-notebook