Training materials
Difficulty level: Intermediate
and Authors: Christine Staiger or Gary Bader or Janick Mathys or Laura Leroi or Michiel Van Bel
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Online material, online course
Workshop on Resources for Plant Sciences, 2023
•• intermediatePlant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateSequence assembly assembly quality control -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateSequence assembly assembly pacbio -
course materials
Introduction to Persistent Identifiers
•• intermediateData management system relevant metadata for data PID metadata Python API pyhandle Persistent Identifiers -
Training materials
PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics
•• intermediateGenotype and phenotype Phylogenomics Evolutionary biology Comparative genomics Functional genomics Plant biology Comparison Visualisation Annotation plants Plants bioinformatics genomics Visualisation Annotation -
hands-on tutorial
NGS analysis
•• intermediateSequencing NGS Next Generation Sequencing