Training materials
Operations: Data handling or RNA-Seq analysis
and Authors: Bartosz Bartmanski or Beate Krøvel Humberset or Michael R. Crusoe or Vilem Ded
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Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
Tutorial
Tutorial on CARNIVAL
•• intermediateMolecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Slides
Slides from Data Management Planning Workshop
• beginnerData management Deposition Data retrieval Data handling Data management plan data management