Training materials
Difficulty level: Intermediate
and Authors: Bérénice Batut or Jessica Kirkpatrick krkptrc2@illinois.edu or Kathi Zarnack or The Carpentries or bgruening
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hands-on tutorial
Hands-on for 'Python - Coding Style' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Virtual Environments For Software Development' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Conda Environments For Software Development' tutorial
•• intermediateSoftware engineering data-science conda jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Testing' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediateGenetic variation variant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'SQL with R' tutorial
•• intermediateSoftware engineering data-science SQL R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Hands-on for 'SQL with Python' tutorial
•• intermediateSoftware engineering data-science SQL Python jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced CLI in Galaxy' tutorial
•• intermediateSoftware engineering data-science bash jupyter-notebook -
hands-on tutorial
Hands-on for 'Plotting in Python' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced R in Galaxy' tutorial
•• intermediateSoftware engineering data-science R
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