Training materials
Authors: Bérénice Batut or Dayane Araujo or Helena Rasche or Jessica Kirkpatrick krkptrc2@illinois.edu or Terri Attwood or nekrut
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Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
hands-on tutorial
Hands-on for 'Use Apptainer containers for running Galaxy jobs' tutorial
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slides
Slides for 'Server Maintenance: Cleanup, Backup, and Restoration' tutorial
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hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
slides
Slides for 'Galaxy from an administrator's point of view' tutorial
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hands-on tutorial
Hands-on for 'Assembly of metagenomic sequencing data' tutorial
• beginnerMetagenomics metagenomics assembly -
hands-on tutorial
Hands-on for 'Virtual Environments For Software Development' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Type annotations' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Conda Environments For Software Development' tutorial
•• intermediateSoftware engineering data-science conda jupyter-notebook