Training materials
Authors: Anika Erxleben or Bérénice Batut or Guillaume Bourque or Janick Mathys or Laura Cooper or Paul Yorke or Radhika Khetani @radhika
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hands-on tutorial
Learning about one gene across biological resources and formats
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
One protein along the UniProt page
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Adding and updating best practice metadata for Galaxy tools using the bio.tools registry
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
• beginnerBioimaging FAIR REMBI -
hands-on tutorial
FAIR Bioimage Metadata
• beginnerFAIR bioimage Bioimage Metadata -
hands-on tutorial
R introduction
• beginnerR script Software engineering data visualisation programming -
hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
e-learning
Basic statistics in Prism
• beginnerStatistics and probability statistics