Training materials
Authors: Andrew Mason or Lars Juhl Jensen or Malachi Griffith or Tuur Muyldermans
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hands-on tutorial
FAIRification of an RNAseq dataset
•• intermediateFAIR clinical data -
Video
RDMbites | FASTQ files in colorspace
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Video
RDMbites | Sequencing Data QC: causes and consequences
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Video
RDMbites | Sequencing data QC: trimming
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Video
RDMbites | FASTQ format
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Video
RDMbites | Sequencing Data QC: FastQC metrics
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Video
RDMbites | RNAseq expression data
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Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Presentation, course materials
Introduction to Nextflow workshop
• beginnerWorkflows Nextflow DSL2 -
Presentation
Reproducible data analysis with RStudio, github and Rmarkdown