Training materials
Authors: Andrew Mason or Jan Slifka or Kaivan Kamali or Marta Lloret Llinares or Nicola Soranzo
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hands-on tutorial
FAIRification of an RNAseq dataset
•• intermediateFAIR clinical data -
Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
Video
RDMbites | FASTQ files in colorspace
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Video
RDMbites | Sequencing Data QC: causes and consequences
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Video
RDMbites | Sequencing data QC: trimming
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Video
RDMbites | FASTQ format
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Video
RDMbites | Sequencing Data QC: FastQC metrics
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Video
RDMbites | RNAseq expression data
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hands-on tutorial
Hands-on for 'Calling variants in diploid systems' tutorial
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hands-on tutorial
Hands-on for 'Scripting Galaxy using the API and BioBlend' tutorial
• beginnerSoftware engineering dev jupyter-notebook