Training materials
Authors: Andrew Mason or Boris Steipe or Bérénice Batut or Egon Willighagen or Jessica Kirkpatrick krkptrc2@illinois.edu or The Carpentries
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hands-on tutorial
FAIRification of an RNAseq dataset
•• intermediateFAIR clinical data -
Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
Creating InChIKeys for IUPAC names
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hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
hands-on tutorial
Information about chemicals
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hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
hands-on tutorial
Hands-on for 'Assembly of metagenomic sequencing data' tutorial
• beginnerMetagenomics metagenomics assembly -
hands-on tutorial
Hands-on for 'Python - Coding Style' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
Video
RDMbites | FASTQ files in colorspace
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Video
RDMbites | Sequencing Data QC: causes and consequences