Training materials
Difficulty level: Intermediate
and Authors: Alexander Botzki or Bartosz Bartmanski or Jan Slifka or Steve Crouch
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podcast, slides
Byte-sized RSE Session 4: Continuous Integration
•• intermediateRSE Research software continuous integration coding skills -
Byte-sized RSE Session 3: Testing your Python code
•• intermediateRSE Research software Python coding skills testing -
podcast, slides
RSE Byte-sized RSE Session 2: Collaboration and Code Review via GitHub
•• intermediateRSE Research software code review -
Byte-sized RSE series
•• intermediateRSE coding skills Research software -
Tutorial
Tutorial on CARNIVAL
•• intermediateMolecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow