Training materials
Difficulty level: Intermediate or Not specified
and Authors: Aidan Budd or Jared Simpson or Malachi Griffith or Personalized Health Informatics Group
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, Training materials, E-learning
Validate Graph Data with SHACL
•• intermediateMedical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
Informatics for RNA-Seq Analysis 2018 Module 4-Reference Free Alignment
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Informatics for RNA-Seq Analysis 2018 Module 1-Introduction to RNA Sequencing Analysis
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Informatics on High-Throughput Sequencing Data 2018 Module 6-De Novo Assmebly
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Informatics on High-Throughput Sequencing Data 2018 Module 1-Introduction to High-Throughput Sequencing
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Bioinformatics for Cancer Genomics 2018 Module 5-Genome Assembly
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Bioinformatics for Cancer Genomics 2018 Module 4-Genome Alignment
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Informatics for RNA-Seq Analysis 2017 Module 5-Isoform Discovery and Alternative Expression