Training materials
Difficulty level: Beginner
and Authors: Anne Segonds-Pichon or Bérénice Batut or Geert van Geest
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Submitting, Finding and Downloading Raw Sequencing Data with ENA
• beginnerFAIR data Metadata Data submission -
hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
NGS - Genome Variant Analysis
• beginnermedicine and health,next generation sequencing,training,agriculture,environmental science,medicine and health medicine and health,next generation sequencing,training,agriculture,environmental science,rémy bruggmann group,medicine and health -
NGS - Quality Control, Alignment, Visualisation
• beginnertraining genes and genomes next generation sequencing environmental science medicine and health -
Long-read Sequence Analysis
• beginnertraining genes and genomes next generation sequencing environmental science medicine and health rémy bruggmann group -
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
hands-on tutorial
Hands-on for 'Assembly of metagenomic sequencing data' tutorial
• beginnerMetagenomics metagenomics assembly -
hands-on tutorial
Hands-on for 'Identification of the micro-organisms in a beer using Nanopore sequencing' tutorial
• beginnerMetagenomics metagenomics nanopore beer citizen science -
hands-on tutorial
Hands-on for 'Upload data to Galaxy' tutorial
• beginnerintroduction -
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnerTranscriptomics transcriptomics bulk rna-seq collections drosophila QC cyoa
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